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The sequences of this region spanning 12S to 16S rRNA in the mtDNA of I. dea, I. evides, and S. gracilis were obtained by PCR with a set of primers (named 12-16S) designed based on the sequence of I. trivittatus (Additional Table2), and the PCR conditions were as described above except the annealing temperature of 57C. Dynamic interactions between transposable elements and their hosts. The NCR1 and NCR2 present in razorfishes are absent in other wrasses based on NCBI data analysis (8 species in 6 genera: Bodianus, Cheilinus, Halichoeres, Macropharyngodon, Parajulis and Pseudolabrus) and PCR verification (1 species in 1 genus: Suezichthys) (Fig. 4); this finding leads to the hypothesis that the additional inserted noncoding sequences of mtDNA in I. trivittatus may be resident alien sequences resulting from the insertion of tRNA-related retrotransposable elements. Mol Biol Evol. Richardson, J. Warner, R. R. and D. R. Robertson. Pseudolabrus eoethinus | Taxonomy - PubChem Seven of the protein-coding genes had incomplete stop codons (T- or TA-). Nat Rev Genet. The final combined PCG dataset had 10,546 characters after alignment, and there was no difference in topologies between the MP and ML tree of Labrida species (Fig. Superclassis/Classis: Actinopterygii We determined the complete mitochondrial genomes of Pseudolabrus sieboldi and P. eoethinus, and analyzed the genome organization, codon usage, and transition/transversion mutation ratio of the mitochondrial genome.The mitochondrial genomes of P. sieboldi and P. eoethinus are 16,507 and 16,508 bp in length, respectively, and consisted of 37 genes (13 protein-coding genes, two ribosomal RNAs . In the invertebrate cricket mitochondrial genome, a transposable element inserted into the 5 flanking segments of the small rRNA gene and caused mtDNA length variation at the individual level [27]. Gunther's parrotfish - Pseudolabrus guentheri. ICZN. Facebook. Tokai Univ. Among these genes, 14 tRNA genes were encoded on the H-strand, and eight were located on the L-strand. Pseudolabrus eoethinus (Richardson, 1846) Phylum Chordata > Class Actinopteri 24: Sebastes inermis Cuvier, 1829 Phylum Chordata > Class Actinopteri 21: Chromis notata (Temminck & Schlegel, 1843) Phylum Chordata > Class Actinopteri 20 . 282433 It is noteworthy that the common portions of the sequences composed the stem of the typical cloverleaf secondary structure of the tRNAVal gene (Fig. Ivanova NV, Zemlak TS, Hanner RH, Hebert PD. Te sugerimos que actualices a un buscador ms moderno. 2011;36:28599. The labrid family is diversified in shape, color, and size and includes many highly colorful species, several color patterns associated with sex and size, and some species that can change their sex from female to male [2]. The Labridae family is the second largest group of marine fishes, and most species in this family inhabit the coastal and continental shelf waters near land to a depth of 200m in tropical and temperate oceans. The species in this genus are popularly referred to as razorfishes due to their very compressed body and the firm, sharp ridge of their steep forehead and snout (Fig. Meded. IUCN Red List of Threatened Species The first step was to obtain the sequences of the 16S rRNA, COI and Cyt b genes by PCR with universal primers [5, 22, 23], and the sequence gaps in these mitochondrial genes can then be obtained by the specific primers designed based on the known sequences listed above; the resulting fragments of the PCR products, obtained with only seven sets of PCR primers, are shorter than 3000bp and can be sequenced by Sanger sequencing. (2008). Sci Rep. 2015;5:13227. Overall, this hypothesis can be employed to explain the occurrence of the genetic invariability of NCR1 and NCR2 and the variability of the Cyt b gene in the mtDNA. Orange parrotfish - Pseudolabrus luculentus. Landscape genomics: natural selection drives the evolution of mitogenome in penguins. These characteristics cause problems in species identification via morphological characteristics for some species. WoRMS - World Register of Marine Species - Pseudolabrus eothinus Revision of the genusPseudolabrus (Labridae) from the East Asian waters. Molecular analysis has revealed that the diversification of the labrid lineage is connected to its specialized pharyngeal jaw apparatus, which played an important role in enabling morphological evolution of the feeding apparatus in wrasses [6]. Pseudolabrus eoethinus - Wikiwand Soc. Tokai Univ. The aligned sequences for I. trivittatus and Pseudolabrus eoethinus are shown for only a short portion of the 5 end of the 16S rRNA gene, and the number indicates the site in the complete mitochondrial genome. Studies on the sex reversal and spawning behavior of five species of Japanese labrid fishes. Twitter. The authors declare that they have no competing interests. In addition, hybrids have been described in labrid fishes [4]. Pseudolabrus eoethinus s una espcie de peix de la famlia dels lbrids i de l'ordre dels perciformes. (In Japanese. The PCRs were carried out in 25l reaction mixtures containing 12.5l 2X Taq PCR Master Mix, 0.5l primers (10M each), 11l distilled water, and 0.5l of DNA template (~100ng). More on author: Richardson. For faster navigation, this Iframe is preloading the Wikiwand page for Pseudolabrus eoethinus . Co., Seoul. Harvard Univ. Pseudolabrus eoethinus, the red naped wrasse, is a species of marine ray-finned fish from the wrasse family, Labridae. Vernacular names 453 pp. Randall JE, Cornish AS. However, two additional inserted noncoding regions (NCR1 and NCR2) were present in the I. trivittatus mtDNA; NCR1 was located between 12S rRNA and tRNAVal and was 121bp long, and NCR2 was situated between tRNAVal and 16S rRNA and was 107bp long. No. Res., 44 (4): 321334. Liu, J.Y. Sci. The evolutionary analysis of Labrida species was separately performed with a combined PCG dataset including ND1, ND2, ND3, ND4L, ND4, ND5, ND6, COI, COII, COIII, ATP8, ATP6 and Cyt b, and their first, second and third codons. Thus, the markers NCR1 and NCR2 provide an additional assessment of the genetic diversity of razorfishes. Adv. The pattern of NORs in the chromosomes of some labrid fishes from Japan. The repeated block in the mtDNA control region of I. trivittatus (Fig. Infraclassis: Teleostei WoRMS taxon status is: "accepted" [ back to Parent ] Pseudolabrus : Animalia Kingdom: Chordata Phylum: Vertebrata Subphylum: Gnathostomata Superclass: Actinopterygii Class: Perciformes Order: Labroidei Suborder: Labridae Family: Pseudolabrus Genus: Pseudolabrus eoethinus ), Okada, K., K. Uchida and K. Matsubara. Pages 153172, pls. 1994. Marine; reef-associated. (2021). 1902. [ 5][ 6] IUCN kategoriserar arten globalt som livskraftig. Pseudolabrus eoethinus (Richardson, 1846) Red naped wrasse Upload your photos and videos . https://doi.org/10.1007/BF02671989. [1] This species was first formally described as Labrus eoethinus by the Scottish naturalist and naval surgeon John Richardson (1787-1865) in 1846 with the type locality given as Canton, China. 2018HY- XKQ0207). Tissue samples from these individuals were preserved in 95% ethanol and stored at 80C before use. Finally, all the sequences from different individuals and species were aligned using ClustalX [39]. [ 1] Inga underarter finns listade i Catalogue of Life. Infraphylum: Gnathostomata Although habitat, temporal and behavioral isolation mechanisms were not apparent, reproductive isolation seemed to occur via premating isolation through visual recognition of conspecific mates because the two species differed in body size and coloration. Wainwright PC, Smith WL, Price SA, Tang KL, Sparks JS, et al. Phylum: Chordata The ADW Team gratefully acknowledges their support. [ 5] Kllor ^ [ a b] 2010 Pseudolabrus eoethinus Frn: IUCN 2012. BMC Genomics. Interestingly, only razorfish species of the genus Iniistius have NCR1 and NCR2, although the divergence of Iniistius is early relative to Pseudolabrus. ADW doesn't cover all species in the world, nor does it include all the latest scientific information about organisms we describe. Fr. Beschrijving van eenige Japansche visschen, en andere zee-schepzelen. Though we edit our accounts for accuracy, we cannot guarantee all information in those accounts. 2010;32:13945. Eco-Education and Resources Centre. Berlin. | Cloffa. The main noncoding region, the so-called control region or displacement loop (D-loop), is the most variable in vertebrate mtDNA and has been used extensively in studies of population genetics. Abst. Such knowledge can enable a better understanding of molecular mechanism underlying morphological evolution in wrasses. 2011;12:615. Biol. The status of Pseudolabrus psittaculus (Richardson, 1840), with notes on other species of the genus. Nelson JS, Grande TC, Wilosn MV. Within the pseudolabrine group, cladistic analysis. Both of the 400bp long ends of each of the two rRNA genes can be folded into typical secondary structures, which is similar to patterns in other wrasses, such as P. eoethinus (GenBank Accession EU560728), and shows the base pairing of helices. Cowman PF, Bellwood DR, van Herwerden L. Dating the evolutionary origins of wrasse lineages (Labridae) and the rise of trophic novelty on coral reefs. Mabuchi K, Miya M, Azuma Y, Nishida M. Independent evolution of the specialized pharyngeal jaw apparatus in cichlid and labrid fishes. : To analyze the sequence polymorphism, a complete Cyt b gene of 1141bp was sequenced to be used as a reference (GenBank Accession: MH19836974). Sci., 26: 1213. FishBase. Ichthyol., 13: 73101. 5). Suggest a dataset. I. dea) to 100% (tRNAVal in I. trivittatus vs. ; Mooney, T.A. Article 1975. The insert events were only observed in I. trivittatus by checking the phylogenetic trees based on the complete mitogenomes of Labrida species. Am. The mitochondrial genome was 16,820bp in length. In contrast, the 12S rRNA, tRNAVal and 16S rRNA genes were similar in length, and their sequences showed high similarity from 90.9% (16S rRNA in I. trivittatus vs. PubMedGoogle Scholar, Mabuchi, K., Nakabo, T. Revision of the genusPseudolabrus (Labridae) from the East Asian waters. BMC Evol Biol 20, 125 (2020). The labrid fish genusPseudolabrus from islands of the southeastern Pacific, with description of a new species from Rapa. Labridae. basionym: Labrus eoethinus Richardson, 1846. holotype of Labrus eoethinus: BMNH:1968.3.11.14. Kim, I.-S. and E.-J. 2006;40:84100. Scientific Collections. Spawning takes place from mid-November to mid-December with the fish pairing up and spawning within the male's territory. Boore JL. Google Scholar. I, 11: 422428. Rep. Brit. Animalia: information (1) Animalia: pictures (20673) Animalia: specimens (7109) Animalia: sounds (722) Animalia: maps (42) Eumetazoa metazoans. For NCR1, the length varies from 115bp in I. dea to 134bp in I. evides, and the similarity is low and no more than 68%. FishBase. Zool. Cladus: Holozoa To obtain the evolutionary history with the insert events about NCR1 and NCR2, we checked the phylogenetic trees based on the complete mitogenome dataset, and on the protein-coding gene dataset of Labrida species, respectively. World Wide Web electronic publication. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. National Fisheries Research & Development Agency, Yangsan. Myers, P., R. Espinosa, C. S. Parr, T. Jones, G. S. Hammond, and T. A. Dewey. New York: Wiley; 2016. Liu, J.Y. Version 03/2018. (In Korean.). Environment: milieu / climate zone / depth range / distribution range Ecology. (In Japanese.). 1983. (2021). ), Present address: The Kyoto University Museum, Kyoto University, 606-01, Kyoto, Japan, Department of Fisheries, Faculty of Agriculture, Kyoto University, 606-01, Kyoto, Japan, You can also search for this author in Mayr, E. 1963. 1994. commercial fishes of the coastal and offshore waters in Korea. Suezichthysis a group of small, sexually dimorphic fishes occurring on sandy bottoms and rocky reefs of the Indo-Pacific and the southwestern Atlantic region. ), Shimada, K. 1993. Genus: Pseudolabrus 13. Complete mitochondrial genome of Odontobutis haifengensis (Perciformes, Odontobutiae): a unique rearrangement of tRNAs and additional non-coding regions identified in the genus Odontobutis. Language links are at the top of the page across from the title. In the case of the species in Iniistius, I. trivittatus, first identified by Randall & Cornish [32], it is only known from deep outer reef habitats, where they occur in small, loose groups along sand ridges. BMC Genomics. Page 206in H. Masuda, K. Amaoka, C. Araga, T. Uyeno and T. Yoshino, eds. Pages 272292in Y.-T. Chu, ed. Press, Tokyo. Ordo: Labriformes, Familia: Labridae The family Labridae made up of 519 species in the world. Araga, C. 1984.Pseudolabrus japonicus. Copeia, 1985: 802832. To FishBase (from synonym Labrus eoethinus Richardson, 1846) To FishBase To FishBase (from synonym Pseudolabrus eothinus (Richardson, 1846)) To FishBase images (Pseudolabrus eoethinus, Hong Kong, by Eric Keung@114E Hong Kong Reef Fish Survey) To GenBank (16 nucleotides; 33 proteins) (from synonym Labrus eoethinus Richardson, 1846) There is no evidence available based on the general structures and molecular markers that distinguish these species from other wrasses. On the status of the serranid fish genus Epinephelus: evidence for paraphyly based upon 16S rDNA sequence. Sexual patterns in the labroid fishes of the Western Caribbean, 1: The wrasses (Labridae), Smithson. Kyushu Univ., 4: 164. Ichthyological Research 44, 379384 (1997). Pseudolabrus eoethinus, the red naped wrasse, is a species of marine ray-finned fish from the wrasse family, Labridae. COPEPEDIA summary for Pseudolabrus eoethinus : T5024664 : Species Part IX. The genus Iniistius in Labridae is represented by 21 named species worldwide [2], and 10 of these species are known to inhabit the reefs of China [3]. 2009;52:62131. 2018;35(6):15479. eoethinus is absent there; both species are widely distributed on the Pacific coasts of southern Japan. Pseudolabrus eoethinus (Richardson, 1846) . Teleostei (teleosts) > Eupercaria/misc (Various families in series Eupercaria) > Labridae (Wrasses) Etymology: Pseudolabrus: Greek, pseudes = false + Greek, labrax = a fish, Dicentrarchus labrax (Ref. Masuda, H. and Y. Kobayashi. Press, Cambridge. Genes coded on the L-strand are in the inner region. mtDNA is under continuous natural selection because the 13 protein-coding genes produce polypeptide products [13], and strong positive selection has occurred on the mitochondrial gene atp8 in phasianid birds for adaptation to the plateau environment [14]. (In Japanese.). Pseudolabrus eoethinus : Geographic Information Geographic Division: Jurisdiction/Origin: Comments Comment: Disclaimer: ITIS taxonomy is based on the latest scientific consensus available, and is provided as a general reference source for interested parties. Correspondence to Verh. Holl. 97. Pacif. from Hapalogenys mucronatus (Eydoux and . (2023). All of the tRNA genes were predicted to fold into the expected cloverleaf secondary structure. More on author: Richardson. I. dea always dive into the sand to search for small animals under the sand, while I. evides lives in sandy, open areas near shallow reefs at approximately 5m [9]. Randall JE, Jonsson L. Clarification of the western Pacific razorfishes (Labridae: Xyrichtyinae) identified as Iniistius baldwini, I. evides and I. maculosus.